張忠華

    2021-03-16 08:03:49 來源:園藝學院          浏覽數:0

張忠華,男,19798月出生,二級教授,博士生導師。

Email: zhangzhonghua_79@163.com

入選國家“傑出青年”科學基金、國家“萬人計劃”中青年科技創新領軍人才與青年拔尖人才、國家“優秀青年”科學基金和山東省泰山學者特聘教授等人才計劃項目,獲國家自然科學二等獎(第2)、第十四屆中國青年科技獎和中華人民共和國成立70周年紀念章等。中國園藝學會分子育種分會秘書長,山東省學科評議組農學組秘書長,青島農業大學校學術委員副主任,Journal of Integrative Plant Biology (JIPB)Journal of Integrative Agriculture (JIA)Horticultural Plant Journal (HPJ)、中國農業科學、園藝學報等期刊編委,第五屆中央國家機關青聯委員,第十二屆全國青聯常委,民盟中央青年工作委員會委員,政協山東省第十三屆委員會委員,政協青島市第十四屆委員會常委。

長期從事黃瓜、甜瓜等蔬菜作物功能基因組學研究,開發了農藝性狀功能基因研究的新方法,鑒定了果實風味、大小、性别決定等多個重要性狀的關鍵基因,并用于多個高産優質新品種選育,加速了蔬菜作物遺傳育種基礎研究,為全基因組分子育種提供了支持。NatureScienceCellNature Genetics等期刊共發表SCI論文70篇,累計影響因子超過700,共被引用1.3餘次,其中(共同)第一或通訊作者在Nature Genetics3篇)Nature Communications2篇)、PNASPlant Cell2篇)期刊發表20篇,編寫了美國Science Publishers出版專著的兩個章節。主持國家級項目10餘項,其中國家重點研發計劃課題1項(1205萬)和國家自然科學基金重點項目各1

 

教育背景

1997.09 - 2001.07:青島農業大學,園藝專業,學士

2001.09 - 2006.07:浙江大學,生命科學院生物信息學專業,博士

 

工作經曆

2006.07 – 2019.09:中國農業科學院蔬菜花卉研究所,博士後/助研/副研/研究員

2013.04 - 2013.10:比利時根特大學,訪問學者

2019.10 – 至今:青島農業大學,園藝學院院長

 

 

主要科研項目

(1) 國家自然科學基金委“傑出青年科學基金”項目“葫蘆科作物功能基因組學”,400萬,20231月至202712月。

(2) 國家自然科學基金委重點項目“甜瓜果實苦味調控基因挖掘與分子機理解析”,289萬,20221月至202612月。

(3) 科技部重點研發計劃項目“蔬菜優異種質資源形成與演化規律”課題主持人,1205萬,20168月至202012月。

(4) 國家“萬人計劃”中青年科技領軍創新人才,主持人,80萬。

(5) 國家“萬人計劃”青年拔尖人才,主持人,210萬。

(6) 國家自然科學委優秀青年科學基金項目,經費100萬元,20141月至201612月。

(7) 國家自然科學基金面上項目華北型和華南型黃瓜分化形成的遺傳基礎,經費85萬,20181月至202112月。

(8) 國家自然科學基金面上項目黃瓜永久群體的基因組作圖及其在果實性狀中的研究,經費85萬,20131月至201612月。

(9) 國家自然科學基金面上項目黃瓜野生變種和栽培變種的全基因組遺傳多樣性挖掘,經費32萬,20101月至201212月。

(10) 973計劃項目主要蔬菜重要品質性狀形成的遺傳機理與分子改良子課題任務,經費100萬元,20121月至201612月。

 

代表性論文和論著 ($ 第一, # 通訊)

  1. Liu Y. $, Li Y. $, Guo H. $, Lv B., Feng J., Wang H., Zhang Z. #, Chai S. #, Gibberellin biosynthesis is required for CPPU-induced parthenocarpy in melon, Horticulture Research, 2023. DOI: 10.1093/hr/uhad084.
  2. Xu Y. $, Zhang H., Zhong Y., Jiang N., Zhong X., Zhang Q., Chai S., Li H., and Zhang Z. #, Comparative genomics analysis of bHLH genes in cucurbits identifies a novel gene regulating cucurbitacin biosynthesis. Horticulture Research, 2022. DOI: 10.1093/hr/uhac038.
  3. Li H. $, Wang S. $, Chai S., Yang Z., Zhang Q., Xin H., Xu Y., Lin S., Chen X., Yao Z., Yang Q., Fei Z., Huang S., and Zhang Z. #, Graph-based pan-genome reveals structural and sequence variations related to agronomic traits and domestication in cucumber. Nature Communications, 2022. 13(1): 682.
  4. Li S. $, Zhang Q., Zhang H., Wang J., Sun J., Yang X., Huang S., and Zhang Z. #, Deletion of a cyclin-dependent protein kinase inhibitor, CsSMR1, leads to dwarf and determinate growth in cucumber (Cucumis sativus L.). Theoretical and Applied Genetics, 2021, DOI: 10.1007/s00122-021-04006-7.
  5. Miao L. $, Li Q., Sun T.S., Chai S., Wang C., Bai L., Sun M., Li Y., Qin X., Zhang Z. #, and Yu X. #, Sugars promote graft union development in the heterograft of cucumber onto pumpkin. Horticulture Research, 2021. 8(1): p. 146.
  6. Qin X. $, Zhang Z. $, Lou Q. $, Xia L., Li J., Li M., Zhou J., Zhao X., Xu Y., Li Q., Yang S., Yu X., Cheng C., Huang S. #, and Chen J. #, Chromosome-scale genome assembly of Cucumis hystrix-a wild species interspecifically cross-compatible with cultivated cucumber. Hortic Res, 2021. 8(1): p. 40.
  7. Xiong X. $, Gou J. $, Liao Q. $, Li Y. $, Zhou Q., Bi G., Li C., Du R., Wang X., Sun T., Guo L., Liang H., Lu P., Wu Y., Zhang Z., Ro D.K., Shang Y., Huang S. #, and Yan J. #, The Taxus genome provides insights into paclitaxel biosynthesis. Nat Plants, 2021. 7(8): p. 1026-1036.
  8. Zhou Q. $, Tang D. $, Huang W., Yang Z., Zhang Y., Hamilton J.P., Visser R.G.F., Bachem C.W.B., Robin Buell C., Zhang Z., Zhang C., and Huang S. #, Haplotype-resolved genome analyses of a heterozygous diploid potato. Nat Genet, 2020. 52(10): p. 1018-1023.
  9. Zhang H. $, Li S. $, Yang L. $, Cai G. $, Chen H., Gao D., Lin T., Cui Q., Wang D., Li Z., Cai R., Bai S., Lucas W.J., Huang S., Zhang Z. #, and Sun J. # Gain-of-function of the 1-aminocyclopropane-1-carboxylate synthase gene ACS1G induces female flower development in cucumber gynoecy. Plant Cell, 2020, doi.org/10.1093/plcell/koaa018.
  10. Zhao G. $, Lian Q. $, Zhang Z. $, Fu Q. $, He Y., Ma S., Ruggieri V., Monforte A.J., Wang P., Julca I., Wang H., Liu J., Xu Y., Wang R., Ji J., Xu Z., Kong W., Zhong Y., Shang J., Pereira L., Argyris J., Zhang J., Mayobre C., Pujol M., Oren E., Ou D., Wang J., Sun D., Zhao S., Zhu Y., Li N., Katzir N., Gur A., Dogimont C., Schaefer H., Fan W., Bendahmane A., Fei Z., Pitrat M., Gabaldon T., Lin T., Garcia-Mas J. #, Xu Y. #, and Huang S. # A comprehensive genome variation map of melon identifies multiple domestication events and loci influencing agronomic traits. Nature Genetics, 2019, 51:1607-1615.
  11. Xie D. $, Xu Y. $, Wang J., Liu W., Zhou Q., Luo S., Huang W., He X., Li Q., Peng Q., Yang X., Yuan J., Yu J., Wang X., Lucas W.J., Huang S., Jiang B. #, and Zhang Z. # The wax gourd genomes offer insights into the genetic diversity and ancestral cucurbit karyotype. Nature communications, 2019, 10(1):5158.
  12. Zhang Z. $, Wang B. $, Wang S. $, Lin T. #, Yang L., Zhao Z., Zhang Z., Huang S., Yang X. # Genome-wide Target Mapping Shows Histone Deacetylase Complex 1 Regulates Cell Proliferation in Cucumber Fruit. Plant Physiology, 2019.8.4, 00532.
  13. Li Q. $, Li H. $, Huang W. $, Xu Y., Zhou Q., Wang S., Ruan J., Huang S., and Zhang Z. # A chromosome-scale genome assembly of cucumber (Cucumis sativus L.). Gigascience, 2019; 8(6):1-10.
  14. Xin T. $, Zhang Z. $, Li S., Zhang S., Li Q., Zhang Z.H., Huang S., and Yang X. # Genetic Regulation of Ethylene Dosage for Cucumber Fruit Elongation. Plant Cell, 2019, 31(5):1063-1076.
  15. Zhu G$, Wang S$, Huang Z, Zhang S, Liao Q, Zhang C, Lin T, Qin M, Peng M, Yang C, Cao X, Han X, Wang X, van der Knaap E, Zhang Z, Cui X, Klee H, Fernie AR, Luo J#, Huang S#. Rewiring of the Fruit Metabolome in Tomato Breeding. Cell. 2018;172(1-2):249-61.
  16. Wang Y, Zhou Q, Zhu G, Wang S, Ma Y, Miao H, Zhang S, Huang S, Zhang Z#, Gu X#. Genetic analysis and identification of a candidate gene associated with in vitro regeneration ability of cucumber. Theor Appl Genet. 2018;131(12):2663-75.
  17. Xiang C$, Duan Y$, Li H, Ma W, Huang S, Sui X#, Zhang Z#, Wang C#. A High-Density EST-SSR-Based Genetic Map and QTL Analysis of Dwarf Trait in Cucurbita pepo L. Int J Mol Sci. 2018;19(10).
  18. Xu C$, Jiao C$, Sun H, Cai X, Wang X, Ge C, Zheng Y, Liu W, Sun X, Xu Y, Deng J, Zhang Z, Huang S, Dai S, Mou B, Wang Q, Fei Z#, Wang Q#. Draft genome of spinach and transcriptome diversity of 120 Spinacia accessions. Nat Commun. 2017;8:15275.
  19. Gao D$, Zhang C$, Zhang S$, Hu B, Wang S, Zhang Z, Huang S#. Mutation in a novel gene SMALL AND CORDATE LEAF 1 affects leaf morphology in cucumber. J Integr Plant Biol. 2017;59(10):736-41.
  20. Zhou Y$, Ma Y$, Zeng J$, Duan L$, Xue X, Wang H, Lin T, Liu Z, Zeng K, Zhong Y, Zhang S, Hu Q, Liu M, Zhang H, Reed J, Moses T, Liu X, Huang P, Qing Z, Liu X, Tu P, Kuang H, Zhang Z, Osbourn A, Ro DK, Shang Y, Huang S#. Convergence and divergence of bitterness biosynthesis and regulation in Cucurbitaceae. Nat Plants. 2016;2:16183.
  21. Lin T$, Wang S$, Zhong Y$, Gao D, Cui Q, Chen H, Zhang Z, Shen H, Weng Y, Huang S#. A Truncated F-Box Protein Confers the Dwarfism in Cucumber. J Genet Genomics. 2016;43(4):223-6.
  22. Chen H$, Sun J$, Li S$, Cui Q, Zhang H, Xin F, Wang H, Lin T, Gao D, Wang S, Li X, Wang D, Zhang Z, Xu Z, Huang S#. An ACC Oxidase Gene Essential for Cucumber Carpel Development. Mol Plant. 2016;9(9):1315-27.
  23. Bu F$, Chen H$, Shi Q, Zhou Q, Gao D, Zhang Z, Huang S#. A major quantitative trait locus conferring subgynoecy in cucumber. Theor Appl Genet. 2016;129(1):97-104.
  24. Zhou Q$, Wang S$, Hu B$, Chen H, Zhang Z#, Huang S#. An ACCUMULATION AND REPLICATION OF CHLOROPLASTS 5 gene mutation confers light green peel in cucumber. J Integr Plant Biol. 2015;57(11):936-42.
  25. Zhou Q$, Miao H$, Li S$, Zhang S, Wang Y, Weng Y, Zhang Z#, Huang S#, Gu X#. A Sequencing-Based Linkage Map of Cucumber. Mol Plant. 2015;8(6):961-3.
  26. Zhang Z$, Mao L$, Chen H$, Bu F$, Li G$, Sun J, Li S, Sun H, Jiao C, Blakely R, Pan J, Cai R, Luo R, Van de Peer Y, Jacobsen E, Fei Z#, Huang S#. Genome-Wide Mapping of Structural Variations Reveals a Copy Number Variant That Determines Reproductive Morphology in Cucumber. Plant Cell. 2015;27(6):1595-604.
  27. Wang S$, Yang X$, Xu M, Lin X, Lin T, Qi J, Shao G, Tian N, Yang Q, Zhang Z, Huang S#. A Rare SNP Identified a TCP Transcription Factor Essential for Tendril Development in Cucumber. Mol Plant. 2015;8(12):1795-808.
  28. Shang Y$, Ma Y$, Zhou Y$, Zhang H$, Duan L, Chen H, Zeng J, Zhou Q, Wang S, Gu W, Liu M, Ren J, Gu X, Zhang S, Wang Y, Yasukawa K, Bouwmeester HJ, Qi X, Zhang Z, Lucas WJ, Huang S#. Biosynthesis, regulation, and domestication of bitterness in cucumber. Science. 2014;346(6213):1084-8.
  29. Lu H$, Lin T$, Klein J, Wang S, Qi J, Zhou Q, Sun J, Zhang Z, Weng Y, Huang S#. QTL-seq identifies an early flowering QTL located near Flowering Locus T in cucumber. Theor Appl Genet. 2014;127(7):1491-9.
  30. Lin T$, Zhu G$, Zhang J$, Xu X$, Yu Q$, Zheng Z$, Zhang Z, Lun Y, Li S, Wang X, Huang Z, Li J, Zhang C, Wang T, Zhang Y, Wang A, Zhang Y, Lin K, Li C, Xiong G, Xue Y, Mazzucato A, Causse M, Fei Z, Giovannoni JJ, Chetelat RT, Zamir D, Stadler T, Li J#, Ye Z#, Du Y#, Huang S#. Genomic analyses provide insights into the history of tomato breeding. Nat Genet. 2014;46(11):1220-6.
  31. Lin K$, Limpens E$, Zhang Z, Ivanov S, Saunders DGO, Mu D, Pang E, Cao H, Cha H, Lin T, Zhou Q, Shang Y, Li Y, Sharma T, van Velzen R, de Ruijter N, Aanen DK, Win J, Kamoun S, Bisseling T, Geurts R, Huang S#. Single Nucleus Genome Sequencing Reveals High Similarity among Nuclei of an Endomycorrhizal Fungus. PLoS Genet. 2014;10(1):e1004078.
  32. Zhang C$, Liu L$, Zheng Z, Sun Y, Zhou L, Yang Y, Cheng F, Zhang Z, Wang X, Huang S, Xie B, Du Y, Bai Y, Li J#. Fine mapping of the Ph-3 gene conferring resistance to late blight (Phytophthora infestans) in tomato. Theor Appl Genet. 2013;126(10):2643-53.
  33. Sun J$, Zhang Z$, Zong X, Huang S, Li Z, Han Y#. A high-resolution cucumber cytogenetic map integrated with the genome assembly. BMC Genomics. 2013;14:461.
  34. Sharma SK$, Bolser D, de Boer J, Sonderkaer M, Amoros W, Carboni MF, D'Ambrosio JM, de la Cruz G, Di Genova A, Douches DS, Eguiluz M, Guo X, Guzman F, Hackett CA, Hamilton JP, Li G, Li Y, Lozano R, Maass A, Marshall D, Martinez D, McLean K, Mejia N, Milne L, Munive S, Nagy I, Ponce O, Ramirez M, Simon R, Thomson SJ, Torres Y, Waugh R, Zhang Z, Huang S, Visser RG, Bachem CW, Sagredo B, Feingold SE, Orjeda G, Veilleux RE, Bonierbale M, Jacobs JM, Milbourne D, Martin DM, Bryan GJ#. Construction of reference chromosome-scale pseudomolecules for potato: integrating the potato genome with genetic and physical maps. G3 2013;3(11):2031-47.
  35. Qi J$, Liu X$, Shen D$, Miao H$, Xie B$, Li X$, Zeng P, Wang S, Shang Y, Gu X, Du Y, Li Y, Lin T, Yuan J, Yang X, Chen J, Chen H, Xiong X, Huang K, Fei Z, Mao L, Tian L, Stadler T, Renner SS, Kamoun S, Lucas WJ, Zhang Z#, Huang S#. A genomic variation map provides insights into the genetic basis of cucumber domestication and diversity. Nat Genet. 2013;45(12):1510-5.
  36. Lou Q$, He Y, Cheng C, Zhang Z, Li J, Huang S, Chen J#. Integration of high-resolution physical and genetic map reveals differential recombination frequency between chromosomes and the genome assembling quality in cucumber. PLoS ONE. 2013;8(5):e62676.
  37. Guo S$, Zhang J$, Sun H$, Salse J$, Lucas WJ, Zhang H, Zheng Y, Mao L, Ren Y, Wang Z, Min J, Guo X, Murat F, Ham BK, Zhang Z, Gao S, Huang M, Xu Y, Zhong S, Bombarely A, Mueller LA, Zhao H, He H, Zhang Y, Zhang Z, Huang S, Tan T, Pang E, Lin K, Hu Q, Kuang H, Ni P, Wang B, Liu J, Kou Q, Hou W, Zou X, Jiang J, Gong G, Klee K, Schoof H, Huang Y, Hu X, Dong S, Liang D, Wang J, Wu K, Xia Y, Zhao X, Zheng Z, Xing M, Liang X, Huang B, Lv T, Wang J, Yin Y, Yi H, Li R, Wu M, Levi A, Zhang X, Giovannoni JJ, Wang J#, Li Y#, Fei Z#, Xu Y#. The draft genome of watermelon (Citrullus lanatus) and resequencing of 20 diverse accessions. Nat Genet. 2013;45(1):51-8.
  38. Tomato Genome Consortium. The tomato genome sequence provides insights into fleshy fruit evolution. Nature. 2012;485(7400):635-41.
  39. Lv J$, Qi J$, Shi Q$, Shen D$, Zhang S$, Shao G, Li H, Sun Z, Weng Y, Shang Y, Gu X, Li X, Zhu X, Zhang J, van Treuren R, van Dooijeweert W, Zhang Z, Huang S#. Genetic Diversity and Population Structure of Cucumber (Cucumis sativus L.). PLoS One. 2012;7(10):e46919.
  40. Zhao X$, Lu J, Zhang Z, Hu J, Huang S, Jin W#. Comparison of the distribution of the repetitive DNA sequences in three variants of Cucumis sativus reveals their phylogenetic relationships. J Genet Genomics. 2011;38(1):39-45.
  41. Wang X$#, Wang H#, Wang J#, Sun R#, Wu J$, Liu S$, Bai Y$, Mun JH$, Bancroft I$, Cheng F, Huang S, Li X, Hua W, Freeling M, Pires JC, Paterson AH, Chalhoub B, Wang B, Hayward A, Sharpe AG, Park BS, Weisshaar B, Liu B, Li B, Tong C, Song C, Duran C, Peng C, Geng C, Koh C, Lin C, Edwards D, Mu D, Shen D, Soumpourou E, Li F, Fraser F, Conant G, Lassalle G, King GJ, Bonnema G, Tang H, Belcram H, Zhou H, Hirakawa H, Abe H, Guo H, Jin H, Parkin IA, Batley J, Kim JS, Just J, Li J, Xu J, Deng J, Kim JA, Yu J, Meng J, Min J, Poulain J, Hatakeyama K, Wu K, Wang L, Fang L, Trick M, Links MG, Zhao M, Jin M, Ramchiary N, Drou N, Berkman PJ, Cai Q, Huang Q, Li R, Tabata S, Cheng S, Zhang S, Sato S, Sun S, Kwon SJ, Choi SR, Lee TH, Fan W, Zhao X, Tan X, Xu X, Wang Y, Qiu Y, Yin Y, Li Y, Du Y, Liao Y, Lim Y, Narusaka Y, Wang Z, Li Z, Xiong Z, Zhang Z. The genome of the mesopolyploid crop species Brassica rapa. Nat Genet. 2011;43(10):1035-9.
  42. The Potato Genome Sequencing Consortium. Genome sequence and analysis of the tuber crop potato. Nature. 2011;475(7355):189-95.
  43. Miao H$, Zhang S, Wang X, Zhang Z, Li M, Mu S, Cheng Z, Zhang R, Huang S, Xie B, Fang Z, Zhang Z, Weng Y, Gu X#. A linkage map of cultivated cucumber (Cucumis sativus L.) with 248 microsatellite marker loci and seven genes for horticulturally important traits. Euphytica. 2011;(2):167-76.
  44. Li Z$, Zhang Z$, Yan P, Huang S, Fei Z, Lin K#. RNA-Seq improves annotation of protein-coding genes in the cucumber genome. BMC Genomics. 2011;12(1):540.
  45. Han Y$, Zhang Z, Huang S, Jin W#. An integrated molecular cytogenetic map of Cucumis sativus L. chromosome 2. BMC Genet. 2011;12(1):18.
  46. Liu C$, Liu J, Li H, Zhang Z, Han Y, Huang S, Jin W#. Karyotyping in melon (Cucumis melo L.) by cross-species fosmid fluorescence in situ hybridization. Cytogenet Genome Res. 2010;129(1-3):241-9.
  47. Kang H$, Weng Y, Yang Y, Zhang Z, Zhang S, Mao Z, Cheng G, Gu X, Huang S#, Xie B#. Fine genetic mapping localizes cucumber scab resistance gene Ccu into an R gene cluster. Theor Appl Genet. 2010.
  48. Guo S$, Zheng Y$, Joung JG, Liu S, Zhang Z, Crasta OR, Sobral BW, Xu Y, Huang S#, Fei Z#. Transcriptome sequencing and comparative analysis of cucumber flowers with different sex types. BMC Genomics. 2010;11:384.
  49. Ren Y$, Zhang Z$, Liu J$, Staub JE, Han Y, Cheng Z, Li X, Lu J, Miao H, Kang H, Xie B, Gu X, Wang X, Du Y, Jin W, Huang S#. An Integrated Genetic and Cytogenetic Map of the Cucumber Genome. PLoS ONE. 2009;4(6):e5795.
  50. Mueller LA$, Lankhorst RK, Tanksley SD, Giovannoni JJ, White R, Vrebalov J, Fei Z, van Eck J, Buels R, Mills AA, Menda N, Tecle IY, Bombarely A, Stack S, Royer SM, Chang S-B, Shearer LA, Kim BD, Jo S-H, Hur C-G, Choi D, Li C-B, Zhao J, Jiang H, Geng Y, Dai Y, Fan H, Chen J, Lu F, Shi J, Sun S, Chen J, Yang X, Lu C, Chen M, Cheng Z, Li C, Ling H, Xue Y, Wang Y, Seymour GB, Bishop GJ, Bryan G, Rogers J, Sims S, Butcher S, Buchan D, Abbott J, Beasley H, Nicholson C, Riddle C, Humphray S, McLaren K, Mathur S, Vyas S, Solanke AU, Kumar R, Gupta V, Sharma AK, Khurana P, Khurana JP, Tyagi A, Sarita, Chowdhury P, Shridhar S, Chattopadhyay D, Pandit A, Singh P, Kumar A, Dixit R, Singh A, Praveen S, Dalal V, Yadav M, Ghazi IA, Gaikwad K, Sharma TR, Mohapatra T, Singh NK, Szinay D, de Jong H, Peters S, van Staveren M, Datema E, Fiers MWEJ, van Ham RCHJ, Lindhout P, Philippot M, Frasse P, Regad F, Zouine M, Bouzayen M, Asamizu E, Sato S, Fukuoka H, Tabata S, Shibata D, Botella MA, Perez-Alonso M, Fernandez-Pedrosa V, Osorio S, Mico A, Granell A, Zhang Z, He J, Huang S, Du Y, Qu D, Liu L, Liu D, Wang J, Ye Z, Yang W, Wang G, Vezzi A, Todesco S, Valle G, Falcone G, Pietrella M, Giuliano G, Grandillo S, Traini A, D'Agostino N, Chiusano ML, Ercolano M, Barone A, Frusciante L, Schoof H, Jcker A, Bruggmann R, Spannagl M, Mayer KXF, Guig R, Camara F, Rombauts S, Fawcett JA, Van de Peer Y, Knapp S, Zamir D#, Stiekema W#. A Snapshot of the Emerging Tomato Genome Sequence. Plant Genome. 2009;2(1):78-92.
  51. Liu QP$#, Wang HS, Zhang ZH, Wu JS, Feng Y, Zhu ZJ#. Divergence in function and expression of the NOD26-like intrinsic proteins in plants. BMC Genomics. 2009;10(1):313.
  52. Li Z$, Huang S$, Liu S, Pan J, Zhang Z, Tao Q, Shi Q, Jia Z, Zhang W, Chen H, Si L, Zhu L, Cai R#. Molecular Isolation of the M Gene Suggests That a Conserved-Residue Conversion Induces the Formation of Bisexual Flowers in Cucumber Plants. Genetics. 2009;182(4):1381-5.
  53. Huang S$#, Li R$, Zhang Z$, Li L$, Gu X$, Fan W$, Lucas WJ$, Wang X, Xie B, Ni P, Ren Y, Zhu H, Li J, Lin K, Jin W, Fei Z, Li G, Staub J, Kilian A, van der Vossen EAG, Wu Y, Guo J, He J, Jia Z, Ren Y, Tian G, Lu Y, Ruan J, Qian W, Wang M, Huang Q, Li B, Xuan Z, Cao J, Asan, Wu Z, Zhang J, Cai Q, Bai Y, Zhao B, Han Y, Li Y, Li X, Wang S, Shi Q, Liu S, Cho WK, Kim J-Y, Xu Y, Heller-Uszynska K, Miao H, Cheng Z, Zhang S, Wu J, Yang Y, Kang H, Li M, Liang H, Ren X, Shi Z, Wen M, Jian M, Yang H, Zhang G, Yang Z, Chen R, Liu S, Li J, Ma L, Liu H, Zhou Y, Zhao J, Fang X, Li G, Fang L, Li Y, Liu D, Zheng H, Zhang Y, Qin N, Li Z, Yang G, Yang S, Bolund L, Kristiansen K, Zheng H, Li S, Zhang X, Yang H, Wang J, Sun R, Zhang B, Jiang S, Wang J#, Du Y#, Li S#. The genome of the cucumber, Cucumis sativus L. Nat Genet. 2009;41(12):1275-81.
  54. Han Y$, Zhang Z$, Liu C, Liu J, Huang S, Jiang J, Jin W#. Centromere repositioning in cucurbit species: Implication of the genomic impact from centromere activation and inactivation. PNAS. 2009;106(35):14937-41.
  55. Han YH$, Zhang ZH, Liu JH, Lu JY, Huang SW, Jin WW#. Distribution of the tandem repeat sequences and karyotyping in cucumber (Cucumis sativus L.) by fluorescence in situ hybridization. Cytogenetic and Genome Research. 2008;122(1):80-8.
  56. Zhang Z$, Deng Y$, Tan J$, Hu S, Yu J, Xue Q#. A genome-wide microsatellite polymorphism database for the indica and japonica rice. DNA Res. 2007;14(1):37-45.

 

編寫著作

  1. Zhang, Z., He, J., and Huang, S#., Chapter 11 Cucumber Genomics, in Genetics, Genomics and Breeding of Cucurbits, Wang, Y.-H., Behera, T.K., and Chittaranjan, K., Editors. Science Publishers. 2011, p. 335-352.
  2. Huang, S#. and Zhang, Z., Chapter11 Comparative Genome Sequencing of Tomato and Potato: Methods and Analysis, in Genetics, Genomics, and Breeding of Tomato, Liedl, E.B., et al., Editors. Science Publishers. 2013, p. 361-380.
  3. Bai Y, Zhang Z#, Fei Z#. Databases and Bioinformatics for Cucurbits Species. In: Grumet R, Katzir N, Garcia-Mas J, editors. Genetics and Genomics of Cucurbitaceae: Springer Nature; 2017.

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